gbeflow
latest
Contents:
API
Data Preprocessing
Optical Flow
Simulated Cell Tracking
Detecting Mesoderm Invagination
gbeflow
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Index
_
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A
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C
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D
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G
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I
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L
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M
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N
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P
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R
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S
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T
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V
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W
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X
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Y
_
__init__() (gbeflow.CziImport method)
(gbeflow.MaskEmbryo method)
(gbeflow.VectorField method)
A
add_image_data() (gbeflow.VectorField method)
C
calc_ellipse() (gbeflow.MaskEmbryo method)
calc_embryo_theta() (in module gbeflow)
calc_flow_path() (in module gbeflow)
calc_line() (in module gbeflow)
calc_rotation() (gbeflow.MaskEmbryo method)
calc_start_ell() (gbeflow.MaskEmbryo method)
calc_track() (gbeflow.VectorField method)
calc_track_set() (gbeflow.VectorField method)
contour_embryo() (gbeflow.MaskEmbryo method)
CziImport (class in gbeflow)
D
df (gbeflow.VectorField attribute)
G
gbeflow (module)
I
img (gbeflow.VectorField attribute)
imshow() (in module gbeflow)
initialize_interpolation() (gbeflow.VectorField method)
interp_init (gbeflow.VectorField attribute)
L
Ldx (gbeflow.VectorField attribute)
Ldy (gbeflow.VectorField attribute)
load_avi_as_array() (in module gbeflow)
M
make_track_movie() (in module gbeflow)
mask_image() (gbeflow.MaskEmbryo method)
MaskEmbryo (class in gbeflow)
N
name (gbeflow.VectorField attribute)
P
pick_start_points() (gbeflow.VectorField method)
print_summary() (gbeflow.CziImport method)
R
read_hyperstack() (in module gbeflow)
reshape_vector_data() (in module gbeflow)
S
save_start_points() (gbeflow.VectorField method)
shift_to_center() (gbeflow.MaskEmbryo method)
squeeze_data() (gbeflow.CziImport method)
starts (gbeflow.VectorField attribute)
,
[1]
T
tidy_vector_data() (in module gbeflow)
tracks (gbeflow.VectorField attribute)
tt (gbeflow.VectorField attribute)
tval (gbeflow.VectorField attribute)
V
VectorField (class in gbeflow)
vx (gbeflow.VectorField attribute)
vy (gbeflow.VectorField attribute)
W
write_hyperstack() (in module gbeflow)
X
xval (gbeflow.VectorField attribute)
xx (gbeflow.VectorField attribute)
Y
yval (gbeflow.VectorField attribute)
yy (gbeflow.VectorField attribute)
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